Dca28235.1
Annotation
- 4-exons
- f-1
- sp|Q0ZCB7_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2811)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28235.1 |
164 |
269 |
392 |
9.18 |
106 |
34 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0ZCB7_POPTR |
100 |
206 |
1332 |
8.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28235.1 |
163 |
254 |
392 |
8.41 |
92 |
36 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2811 |
Augustus |
mRNA |
36796 |
44330 |
. |
- |
. |
ID=Dca28235.1;Parent=Dca28235 |
| scaffold2811 |
Augustus |
exon |
36796 |
36985 |
. |
- |
. |
ID=Dca28235.1.exon1;Parent=Dca28235.1 |
| scaffold2811 |
Augustus |
exon |
37904 |
38088 |
. |
- |
. |
ID=Dca28235.1.exon2;Parent=Dca28235.1 |
| scaffold2811 |
Augustus |
exon |
40098 |
40537 |
. |
- |
. |
ID=Dca28235.1.exon3;Parent=Dca28235.1 |
| scaffold2811 |
Augustus |
exon |
43967 |
44330 |
. |
- |
. |
ID=Dca28235.1.exon4;Parent=Dca28235.1 |
