Carnation DB

Dca2824.1

Annotation

8-exons
f-1
sp|B9SZ36_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0212730#unknown#0F0P0C
Os02t0754000-02 TLDc domain containing protein.
Repeat List (scaffold11)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2824.1	1	390	390	56.41	390	55	6e-103
Target_name	Start	End	Length	Cov(%)
sp\|B9SZ36_RICCO	1	375	375	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2824.1	6	390	390	50	385	51	3e-91
Target_name	Start	End	Length	Cov(%)
Os02t0754000-02	7	364	365	98.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11	Augus-PASA	mRNA	290082	293383	.	+	.	ID=Dca2824.1;Parent=Dca2824
scaffold11	Augus-PASA	exon	290082	290189	.	+	.	ID=Dca2824.1.exon1;Parent=Dca2824.1
scaffold11	Augustus	exon	290828	291420	.	+	.	ID=Dca2824.1.exon2;Parent=Dca2824.1
scaffold11	Augus-PASA	exon	291522	291594	.	+	.	ID=Dca2824.1.exon3;Parent=Dca2824.1
scaffold11	Augus-PASA	exon	292096	292173	.	+	.	ID=Dca2824.1.exon4;Parent=Dca2824.1
scaffold11	Augus-PASA	exon	292269	292332	.	+	.	ID=Dca2824.1.exon5;Parent=Dca2824.1
scaffold11	Augus-PASA	exon	292584	292671	.	+	.	ID=Dca2824.1.exon6;Parent=Dca2824.1
scaffold11	Augus-PASA	exon	293078	293162	.	+	.	ID=Dca2824.1.exon7;Parent=Dca2824.1
scaffold11	Augus-PASA	exon	293300	293383	.	+	.	ID=Dca2824.1.exon8;Parent=Dca2824.1