Dca28271.1
Annotation
- 3-exons
- f-1
- sp|O23588_ARATH#Retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=dl4760c#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2815)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28271.1 |
52 |
319 |
329 |
39.2 |
268 |
44 |
2e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23588_ARATH |
791 |
1075 |
1433 |
19.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28271.1 |
165 |
319 |
329 |
24.31 |
155 |
50 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
85 |
244 |
1262 |
12.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2815 |
Augustus |
mRNA |
3774 |
5091 |
. |
+ |
. |
ID=Dca28271.1;Parent=Dca28271 |
| scaffold2815 |
Augustus |
exon |
3774 |
3927 |
. |
+ |
. |
ID=Dca28271.1.exon1;Parent=Dca28271.1 |
| scaffold2815 |
Augustus |
exon |
4084 |
4421 |
. |
+ |
. |
ID=Dca28271.1.exon2;Parent=Dca28271.1 |
| scaffold2815 |
Augustus |
exon |
4594 |
5091 |
. |
+ |
. |
ID=Dca28271.1.exon3;Parent=Dca28271.1 |
