Dca28316.1
Annotation
- 3-exons
- f-1
- sp|A5AFM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002577#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold282)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28316.1 |
52 |
713 |
714 |
48.87 |
662 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AFM0_VITVI |
192 |
853 |
1109 |
59.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28316.1 |
55 |
714 |
714 |
30.67 |
660 |
32 |
8e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1011 |
1401 |
45.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold282 |
Augustus |
mRNA |
161936 |
164239 |
. |
+ |
. |
ID=Dca28316.1;Parent=Dca28316 |
| scaffold282 |
Augustus |
exon |
161936 |
162520 |
. |
+ |
. |
ID=Dca28316.1.exon1;Parent=Dca28316.1 |
| scaffold282 |
Augustus |
exon |
162611 |
163775 |
. |
+ |
. |
ID=Dca28316.1.exon2;Parent=Dca28316.1 |
| scaffold282 |
Augustus |
exon |
163845 |
164239 |
. |
+ |
. |
ID=Dca28316.1.exon3;Parent=Dca28316.1 |
