Dca28483.1
Annotation
- 3-exons
- f-1
- sp|Q9FX79_ARATH#Putative retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=F19K19.5#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold284)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28483.1 |
18 |
460 |
476 |
42.64 |
443 |
44 |
2e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FX79_ARATH |
623 |
1090 |
1413 |
33.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28483.1 |
18 |
457 |
476 |
35.71 |
440 |
35 |
3e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
570 |
1057 |
1401 |
34.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold284 |
Augustus |
mRNA |
501 |
2329 |
. |
+ |
. |
ID=Dca28483.1;Parent=Dca28483 |
| scaffold284 |
Augustus |
exon |
501 |
1389 |
. |
+ |
. |
ID=Dca28483.1.exon1;Parent=Dca28483.1 |
| scaffold284 |
Augustus |
exon |
1621 |
2095 |
. |
+ |
. |
ID=Dca28483.1.exon2;Parent=Dca28483.1 |
| scaffold284 |
Augustus |
exon |
2263 |
2329 |
. |
+ |
. |
ID=Dca28483.1.exon3;Parent=Dca28483.1 |
