Carnation DB

Dca28497.1

Annotation

6-exons
f-1
sp|P93103_CHERU#Cyclin-D like protein#Chenopodium rubrum (Red goosefoot) (Blitum rubrum)#Name=cycD1#GO:0005634#0F0P1C
Repeat List (scaffold284)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28497.1	1	285	299	63.54	285	64	2e-92
Target_name	Start	End	Length	Cov(%)
sp\|P93103_CHERU	1	289	372	77.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28497.1	61	286	299	40.46	226	51	4e-59
Target_name	Start	End	Length	Cov(%)
AT5G65420.3	37	273	318	74.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold284	Augus-PASA	mRNA	102768	106920	.	+	.	ID=Dca28497.1;Parent=Dca28497
scaffold284	Augus-PASA	exon	102768	103103	.	+	.	ID=Dca28497.1.exon1;Parent=Dca28497.1
scaffold284	Augus-PASA	exon	103538	103624	.	+	.	ID=Dca28497.1.exon2;Parent=Dca28497.1
scaffold284	Augus-PASA	exon	103740	103838	.	+	.	ID=Dca28497.1.exon3;Parent=Dca28497.1
scaffold284	Augus-PASA	exon	104086	104287	.	+	.	ID=Dca28497.1.exon4;Parent=Dca28497.1
scaffold284	Augustus	exon	104596	104726	.	+	.	ID=Dca28497.1.exon5;Parent=Dca28497.1
scaffold284	Augustus	exon	106876	106920	.	+	.	ID=Dca28497.1.exon6;Parent=Dca28497.1