Carnation DB

Dca28519.1

Annotation

5-exons
f-1
sp|F6HE59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g01220#GO:0008234;GO:0006508#1F1P0C
AT4G15880.1 | Symbols: ESD4, ATESD4 | Cysteine proteinases superfamily protein | chr4:9012769-9015797 FORWARD LENGTH=489
Repeat List (scaffold2841)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28519.1	1	363	368	49.45	363	39	5e-60
Target_name	Start	End	Length	Cov(%)
sp\|F6HE59_VITVI	1	468	522	89.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28519.1	1	363	368	36.41	363	31	2e-31
Target_name	Start	End	Length	Cov(%)
AT4G15880.1	1	435	489	88.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2841	Augustus	mRNA	17254	20365	.	+	.	ID=Dca28519.1;Parent=Dca28519
scaffold2841	Augustus	exon	17254	17949	.	+	.	ID=Dca28519.1.exon1;Parent=Dca28519.1
scaffold2841	Augustus	exon	18136	18215	.	+	.	ID=Dca28519.1.exon2;Parent=Dca28519.1
scaffold2841	Augustus	exon	18441	18558	.	+	.	ID=Dca28519.1.exon3;Parent=Dca28519.1
scaffold2841	Augustus	exon	19533	19652	.	+	.	ID=Dca28519.1.exon4;Parent=Dca28519.1
scaffold2841	Augustus	exon	20273	20365	.	+	.	ID=Dca28519.1.exon5;Parent=Dca28519.1