Carnation DB

Dca2882.1

Annotation

5-exons
f-1
sp|D7TD16_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0057g00320#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT3G07840.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:2501893-2503475 REVERSE LENGTH=401
Repeat List (scaffold110)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2882.1	25	395	404	50.24	371	55	8e-116
Target_name	Start	End	Length	Cov(%)
sp\|D7TD16_VITVI	28	393	393	93.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2882.1	26	401	404	45.79	376	50	2e-109
Target_name	Start	End	Length	Cov(%)
AT3G07840.1	24	395	401	92.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold110	Augustus	mRNA	2797	5678	.	+	.	ID=Dca2882.1;Parent=Dca2882
scaffold110	Augustus	exon	2797	2855	.	+	.	ID=Dca2882.1.exon1;Parent=Dca2882.1
scaffold110	Augustus	exon	3354	3414	.	+	.	ID=Dca2882.1.exon2;Parent=Dca2882.1
scaffold110	Augustus	exon	4001	4321	.	+	.	ID=Dca2882.1.exon3;Parent=Dca2882.1
scaffold110	Augustus	exon	4448	4963	.	+	.	ID=Dca2882.1.exon4;Parent=Dca2882.1
scaffold110	Augustus	exon	5421	5678	.	+	.	ID=Dca2882.1.exon5;Parent=Dca2882.1