Carnation DB

Dca28984.1

Annotation

5-exons
f-1
sp|F6H0M9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g03990#unknown#0F0P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold2894)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28984.1	233	729	753	29.88	497	41	2e-80
Target_name	Start	End	Length	Cov(%)
sp\|F6H0M9_VITVI	44	590	616	88.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28984.1	230	732	753	26.42	503	36	2e-60
Target_name	Start	End	Length	Cov(%)
AT1G36990.1	43	576	581	91.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2894	Augustus	mRNA	35625	40939	.	+	.	ID=Dca28984.1;Parent=Dca28984
scaffold2894	Augustus	exon	35625	36303	.	+	.	ID=Dca28984.1.exon1;Parent=Dca28984.1
scaffold2894	Augustus	exon	37654	38375	.	+	.	ID=Dca28984.1.exon2;Parent=Dca28984.1
scaffold2894	Augus-PASA	exon	38453	38539	.	+	.	ID=Dca28984.1.exon3;Parent=Dca28984.1
scaffold2894	Augus-PASA	exon	39193	39834	.	+	.	ID=Dca28984.1.exon4;Parent=Dca28984.1
scaffold2894	Augus-PASA	exon	40808	40939	.	+	.	ID=Dca28984.1.exon5;Parent=Dca28984.1