Dca29025.1
Annotation
- 4-exons
- f-1
- sp|B9N0G7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_681047#unknown#0F0P0C
- AT4G21192.1 | Symbols: | Cytochrome c oxidase biogenesis protein Cmc1-like | chr4:11294563-11295192 FORWARD LENGTH=80
- Repeat List (scaffold29)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29025.1 |
19 |
98 |
98 |
66.32 |
80 |
82 |
3e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N0G7_POPTR |
1 |
80 |
87 |
91.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29025.1 |
19 |
96 |
98 |
65.3 |
78 |
82 |
5e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G21192.1 |
1 |
79 |
80 |
98.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold29 |
Augustus |
mRNA |
31956 |
32738 |
. |
+ |
. |
ID=Dca29025.1;Parent=Dca29025 |
| scaffold29 |
Augustus |
exon |
31956 |
31998 |
. |
+ |
. |
ID=Dca29025.1.exon1;Parent=Dca29025.1 |
| scaffold29 |
Augustus |
exon |
32132 |
32187 |
. |
+ |
. |
ID=Dca29025.1.exon2;Parent=Dca29025.1 |
| scaffold29 |
Augustus |
exon |
32441 |
32545 |
. |
+ |
. |
ID=Dca29025.1.exon3;Parent=Dca29025.1 |
| scaffold29 |
Augustus |
exon |
32646 |
32738 |
. |
+ |
. |
ID=Dca29025.1.exon4;Parent=Dca29025.1 |
