Carnation DB

Dca29069.1

Annotation

8-exons
f-1
sp|B9HHK3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_419433#GO:0005488#1F0P0C
AT2G39910.1 | Symbols: | ARM repeat superfamily protein | chr2:16660604-16662886 FORWARD LENGTH=436
Repeat List (scaffold29)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29069.1	1	288	337	59.05	288	70	3e-121
Target_name	Start	End	Length	Cov(%)
sp\|B9HHK3_POPTR	125	412	412	69.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29069.1	1	291	337	53.41	291	62	1e-104
Target_name	Start	End	Length	Cov(%)
AT2G39910.1	141	431	436	66.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold29	Augustus	mRNA	238605	241186	.	-	.	ID=Dca29069.1;Parent=Dca29069
scaffold29	Augustus	exon	238605	238727	.	-	.	ID=Dca29069.1.exon1;Parent=Dca29069.1
scaffold29	Augustus	exon	238935	239031	.	-	.	ID=Dca29069.1.exon2;Parent=Dca29069.1
scaffold29	Augustus	exon	239145	239246	.	-	.	ID=Dca29069.1.exon3;Parent=Dca29069.1
scaffold29	Augustus	exon	239471	239535	.	-	.	ID=Dca29069.1.exon4;Parent=Dca29069.1
scaffold29	Augustus	exon	239621	239816	.	-	.	ID=Dca29069.1.exon5;Parent=Dca29069.1
scaffold29	Augustus	exon	239909	240099	.	-	.	ID=Dca29069.1.exon6;Parent=Dca29069.1
scaffold29	Augustus	exon	240325	240411	.	-	.	ID=Dca29069.1.exon7;Parent=Dca29069.1
scaffold29	Augustus	exon	241034	241186	.	-	.	ID=Dca29069.1.exon8;Parent=Dca29069.1