Dca29250.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2917)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29250.1 |
18 |
207 |
476 |
11.97 |
190 |
30 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
15 |
202 |
896 |
20.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29250.1 |
256 |
459 |
476 |
16.17 |
204 |
38 |
5e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1182 |
1382 |
1401 |
14.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2917 |
Augustus |
mRNA |
1622 |
6451 |
. |
+ |
. |
ID=Dca29250.1;Parent=Dca29250 |
| scaffold2917 |
Augustus |
exon |
1622 |
2387 |
. |
+ |
. |
ID=Dca29250.1.exon1;Parent=Dca29250.1 |
| scaffold2917 |
Augustus |
exon |
5787 |
6451 |
. |
+ |
. |
ID=Dca29250.1.exon2;Parent=Dca29250.1 |
