Carnation DB

Dca3.1

Annotation

8-exons
f-1
sp|F6I2Z6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02390#GO:0005737;GO:0005524;GO:0004427;GO:0000287;GO:0004672#4F0P1C
AT2G46860.1 | Symbols: AtPPa3, PPa3 | pyrophosphorylase 3 | chr2:19253843-19255060 FORWARD LENGTH=216
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3.1	22	219	219	78.99	198	88	6e-103
Target_name	Start	End	Length	Cov(%)
sp\|F6I2Z6_VITVI	706	903	903	21.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3.1	16	219	219	78.99	204	85	1e-102
Target_name	Start	End	Length	Cov(%)
AT2G46860.1	13	216	216	94.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	44521	45903	.	-	.	ID=Dca3.1;Parent=Dca3
scaffold1	Augustus	exon	44521	44563	.	-	.	ID=Dca3.1.exon1;Parent=Dca3.1
scaffold1	Augustus	exon	44650	44731	.	-	.	ID=Dca3.1.exon2;Parent=Dca3.1
scaffold1	Augustus	exon	44815	44935	.	-	.	ID=Dca3.1.exon3;Parent=Dca3.1
scaffold1	Augustus	exon	45024	45089	.	-	.	ID=Dca3.1.exon4;Parent=Dca3.1
scaffold1	Augustus	exon	45211	45318	.	-	.	ID=Dca3.1.exon5;Parent=Dca3.1
scaffold1	Augustus	exon	45399	45464	.	-	.	ID=Dca3.1.exon6;Parent=Dca3.1
scaffold1	Augustus	exon	45636	45664	.	-	.	ID=Dca3.1.exon7;Parent=Dca3.1
scaffold1	Augustus	exon	45759	45903	.	-	.	ID=Dca3.1.exon8;Parent=Dca3.1