Carnation DB

Dca30013.1

Annotation

10-exons
f-1
sp|D7LKT7_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_669657#GO:0005795;GO:0008378#1F0P1C
AT2G38150.1 | Symbols: | alpha 1,4-glycosyltransferase family protein | chr2:15981700-15982917 REVERSE LENGTH=405
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30013.1	1	204	972	8.95	204	43	2e-47
Target_name	Start	End	Length	Cov(%)
sp\|D7LKT7_ARALL	507	709	750	27.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30013.1	1	204	972	8.95	204	43	1e-46
Target_name	Start	End	Length	Cov(%)
AT2G38150.1	161	364	405	50.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augustus	mRNA	431750	438803	.	+	.	ID=Dca30013.1;Parent=Dca30013
scaffold3	Augustus	exon	431750	432356	.	+	.	ID=Dca30013.1.exon1;Parent=Dca30013.1
scaffold3	Augustus	exon	433296	434032	.	+	.	ID=Dca30013.1.exon2;Parent=Dca30013.1
scaffold3	Augustus	exon	436597	436655	.	+	.	ID=Dca30013.1.exon3;Parent=Dca30013.1
scaffold3	Augustus	exon	436764	437672	.	+	.	ID=Dca30013.1.exon4;Parent=Dca30013.1
scaffold3	Augustus	exon	437764	437818	.	+	.	ID=Dca30013.1.exon5;Parent=Dca30013.1
scaffold3	Augustus	exon	437892	438026	.	+	.	ID=Dca30013.1.exon6;Parent=Dca30013.1
scaffold3	Augustus	exon	438112	438195	.	+	.	ID=Dca30013.1.exon7;Parent=Dca30013.1
scaffold3	Augustus	exon	438275	438322	.	+	.	ID=Dca30013.1.exon8;Parent=Dca30013.1
scaffold3	Augustus	exon	438424	438527	.	+	.	ID=Dca30013.1.exon9;Parent=Dca30013.1
scaffold3	Augustus	exon	438623	438803	.	+	.	ID=Dca30013.1.exon10;Parent=Dca30013.1
scaffold3	Augustus	mRNA	435943	438803	.	+	.	ID=Dca30013.2;Parent=Dca30013
scaffold3	Augustus	exon	435943	436108	.	+	.	ID=Dca30013.2.exon1;Parent=Dca30013.2
scaffold3	Augustus	exon	436446	436510	.	+	.	ID=Dca30013.2.exon2;Parent=Dca30013.2
scaffold3	Augustus	exon	436597	436655	.	+	.	ID=Dca30013.2.exon3;Parent=Dca30013.2
scaffold3	Augustus	exon	436764	437672	.	+	.	ID=Dca30013.2.exon4;Parent=Dca30013.2
scaffold3	Augustus	exon	437764	437818	.	+	.	ID=Dca30013.2.exon5;Parent=Dca30013.2
scaffold3	Augustus	exon	437892	438026	.	+	.	ID=Dca30013.2.exon6;Parent=Dca30013.2
scaffold3	Augustus	exon	438112	438195	.	+	.	ID=Dca30013.2.exon7;Parent=Dca30013.2
scaffold3	Augustus	exon	438275	438322	.	+	.	ID=Dca30013.2.exon8;Parent=Dca30013.2
scaffold3	Augustus	exon	438424	438527	.	+	.	ID=Dca30013.2.exon9;Parent=Dca30013.2
scaffold3	Augustus	exon	438623	438803	.	+	.	ID=Dca30013.2.exon10;Parent=Dca30013.2