Carnation DB

Dca30025.1

Annotation

7-exons
f-1
sp|D7L7H5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_342773#GO:0016020;GO:0046873#1F0P1C
AT2G04305.1 | Symbols: | Magnesium transporter CorA-like family protein | chr2:1501679-1503448 REVERSE LENGTH=434
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30025.1	16	455	536	61.38	440	75	0
Target_name	Start	End	Length	Cov(%)
sp\|D7L7H5_ARALL	11	451	453	97.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30025.1	39	455	536	58.39	417	76	0
Target_name	Start	End	Length	Cov(%)
AT2G04305.1	35	432	434	91.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augustus	mRNA	515886	521812	.	-	.	ID=Dca30025.1;Parent=Dca30025
scaffold3	Augustus	exon	515886	515994	.	-	.	ID=Dca30025.1.exon1;Parent=Dca30025.1
scaffold3	Augustus	exon	516206	516295	.	-	.	ID=Dca30025.1.exon2;Parent=Dca30025.1
scaffold3	Augustus	exon	517990	518044	.	-	.	ID=Dca30025.1.exon3;Parent=Dca30025.1
scaffold3	Augustus	exon	518814	519065	.	-	.	ID=Dca30025.1.exon4;Parent=Dca30025.1
scaffold3	Augustus	exon	519551	519815	.	-	.	ID=Dca30025.1.exon5;Parent=Dca30025.1
scaffold3	Augustus	exon	520301	520380	.	-	.	ID=Dca30025.1.exon6;Parent=Dca30025.1
scaffold3	Augustus	exon	521053	521812	.	-	.	ID=Dca30025.1.exon7;Parent=Dca30025.1