Carnation DB

Dca30130.1

Annotation

12-exons
f-1
sp|B9SJW2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0576730#GO:0016779;GO:0009058#1F1P0C
AT2G01220.2 | Symbols: | Nucleotidylyl transferase superfamily protein | chr2:123301-126213 FORWARD LENGTH=388
Repeat List (scaffold300)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30130.1	6	380	385	72.46	375	75	4e-168
Target_name	Start	End	Length	Cov(%)
sp\|B9SJW2_RICCO	6	380	385	97.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30130.1	6	382	385	64.67	377	67	4e-151
Target_name	Start	End	Length	Cov(%)
AT2G01220.2	6	382	388	97.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold300	Augus-PASA	mRNA	74503	82331	.	-	.	ID=Dca30130.1;Parent=Dca30130
scaffold300	Augus-PASA	exon	74503	74619	.	-	.	ID=Dca30130.1.exon1;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	74746	74856	.	-	.	ID=Dca30130.1.exon2;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	75257	75363	.	-	.	ID=Dca30130.1.exon3;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	77361	77470	.	-	.	ID=Dca30130.1.exon4;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	78070	78166	.	-	.	ID=Dca30130.1.exon5;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	78252	78408	.	-	.	ID=Dca30130.1.exon6;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	79454	79507	.	-	.	ID=Dca30130.1.exon7;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	80015	80075	.	-	.	ID=Dca30130.1.exon8;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	81218	81287	.	-	.	ID=Dca30130.1.exon9;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	81853	81937	.	-	.	ID=Dca30130.1.exon10;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	82019	82117	.	-	.	ID=Dca30130.1.exon11;Parent=Dca30130.1
scaffold300	Augus-PASA	exon	82242	82331	.	-	.	ID=Dca30130.1.exon12;Parent=Dca30130.1