Dca30180.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold30071)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30180.1 |
1 |
215 |
216 |
52.77 |
215 |
44 |
2e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
514 |
964 |
27.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30180.1 |
1 |
72 |
216 |
15.74 |
72 |
44 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
746 |
1428 |
5.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30071 |
Augustus |
mRNA |
279 |
1043 |
. |
+ |
. |
ID=Dca30180.1;Parent=Dca30180 |
| scaffold30071 |
Augustus |
exon |
279 |
515 |
. |
+ |
. |
ID=Dca30180.1.exon1;Parent=Dca30180.1 |
| scaffold30071 |
Augustus |
exon |
630 |
1043 |
. |
+ |
. |
ID=Dca30180.1.exon2;Parent=Dca30180.1 |
