Dca30264.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold30166)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30264.1 |
33 |
260 |
275 |
30.9 |
228 |
37 |
1e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
58 |
289 |
1501 |
15.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30264.1 |
35 |
182 |
275 |
16.72 |
148 |
32 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
104 |
251 |
296 |
50 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30166 |
Augustus |
mRNA |
297 |
1208 |
. |
+ |
. |
ID=Dca30264.1;Parent=Dca30264 |
| scaffold30166 |
Augustus |
exon |
297 |
394 |
. |
+ |
. |
ID=Dca30264.1.exon1;Parent=Dca30264.1 |
| scaffold30166 |
Augustus |
exon |
480 |
1208 |
. |
+ |
. |
ID=Dca30264.1.exon2;Parent=Dca30264.1 |
