Carnation DB

Dca30328.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold3025)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30328.1	71	365	410	27.56	295	35	7e-45
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	699	1021	1114	28.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30328.1	289	376	410	7.56	88	34	8e-08
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	267	359	746	12.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3025	Augustus	mRNA	3741	13171	.	-	.	ID=Dca30328.1;Parent=Dca30328
scaffold3025	Augustus	exon	3741	3831	.	-	.	ID=Dca30328.1.exon1;Parent=Dca30328.1
scaffold3025	Augustus	exon	10811	11244	.	-	.	ID=Dca30328.1.exon2;Parent=Dca30328.1
scaffold3025	Augustus	exon	11330	11910	.	-	.	ID=Dca30328.1.exon3;Parent=Dca30328.1
scaffold3025	Augustus	exon	12434	12633	.	-	.	ID=Dca30328.1.exon4;Parent=Dca30328.1
scaffold3025	Augustus	exon	13155	13171	.	-	.	ID=Dca30328.1.exon5;Parent=Dca30328.1