Dca30411.1
Annotation
- 4-exons
- f-1
- sp|B9HR10_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_804096#GO:0005089#1F0P0C
- Os09t0544800-01 Rop nucleotide exchanger, PRONE domain containing protein.
- Repeat List (scaffold3035)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30411.1 |
79 |
513 |
513 |
59.64 |
435 |
69 |
2e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HR10_POPTR |
133 |
577 |
577 |
77.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30411.1 |
79 |
513 |
513 |
55.94 |
435 |
65 |
6e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0544800-01 |
120 |
561 |
562 |
78.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3035 |
Augustus |
mRNA |
24627 |
27781 |
. |
+ |
. |
ID=Dca30411.1;Parent=Dca30411 |
| scaffold3035 |
Augustus |
exon |
24627 |
24873 |
. |
+ |
. |
ID=Dca30411.1.exon1;Parent=Dca30411.1 |
| scaffold3035 |
Augustus |
exon |
26271 |
26785 |
. |
+ |
. |
ID=Dca30411.1.exon2;Parent=Dca30411.1 |
| scaffold3035 |
Augustus |
exon |
26920 |
27273 |
. |
+ |
. |
ID=Dca30411.1.exon3;Parent=Dca30411.1 |
| scaffold3035 |
Augus-PASA |
exon |
27356 |
27781 |
. |
+ |
. |
ID=Dca30411.1.exon4;Parent=Dca30411.1 |
