Dca30423.1
Annotation
- 2-exons
- f-1
- sp|B9I9F9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572581#GO:0005488#1F0P0C
- AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:23208247-23209893 REVERSE LENGTH=548
- Repeat List (scaffold3037)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30423.1 |
39 |
226 |
232 |
27.15 |
188 |
34 |
9e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I9F9_POPTR |
218 |
405 |
474 |
39.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30423.1 |
42 |
221 |
232 |
23.7 |
180 |
31 |
4e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G62680.1 |
279 |
458 |
548 |
32.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3037 |
Augustus |
mRNA |
5049 |
6599 |
. |
- |
. |
ID=Dca30423.1;Parent=Dca30423 |
| scaffold3037 |
Augustus |
exon |
5049 |
5406 |
. |
- |
. |
ID=Dca30423.1.exon1;Parent=Dca30423.1 |
| scaffold3037 |
Augustus |
exon |
6259 |
6599 |
. |
- |
. |
ID=Dca30423.1.exon2;Parent=Dca30423.1 |
