Carnation DB

Dca30483.1

Annotation

13-exons
f-1
sp|F6GTA1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05760#unknown#0F0P0C
sp|B9R952_RICCO#Nuclear protein zap, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1513760#unknown#0F0P0C
Repeat List (scaffold3044)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30483.1	1	149	849	7.06	149	39	2e-15
Target_name	Start	End	Length	Cov(%)
sp\|F6GTA1_VITVI	1	142	735	19.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30483.1	426	842	849	27.2	417	54	4e-123
Target_name	Start	End	Length	Cov(%)
AT5G62760.1	241	656	661	62.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3044	Augustus	mRNA	16696	22578	.	+	.	ID=Dca30483.1;Parent=Dca30483
scaffold3044	Augustus	exon	16696	17916	.	+	.	ID=Dca30483.1.exon1;Parent=Dca30483.1
scaffold3044	Augustus	exon	18143	18329	.	+	.	ID=Dca30483.1.exon2;Parent=Dca30483.1
scaffold3044	Augustus	exon	18996	19108	.	+	.	ID=Dca30483.1.exon3;Parent=Dca30483.1
scaffold3044	Augustus	exon	19231	19326	.	+	.	ID=Dca30483.1.exon4;Parent=Dca30483.1
scaffold3044	Augustus	exon	19466	19528	.	+	.	ID=Dca30483.1.exon5;Parent=Dca30483.1
scaffold3044	Augustus	exon	19826	19930	.	+	.	ID=Dca30483.1.exon6;Parent=Dca30483.1
scaffold3044	Augustus	exon	20452	20502	.	+	.	ID=Dca30483.1.exon7;Parent=Dca30483.1
scaffold3044	Augustus	exon	21061	21165	.	+	.	ID=Dca30483.1.exon8;Parent=Dca30483.1
scaffold3044	Augustus	exon	21265	21309	.	+	.	ID=Dca30483.1.exon9;Parent=Dca30483.1
scaffold3044	Augustus	exon	21443	21545	.	+	.	ID=Dca30483.1.exon10;Parent=Dca30483.1
scaffold3044	Augustus	exon	21872	22080	.	+	.	ID=Dca30483.1.exon11;Parent=Dca30483.1
scaffold3044	Augustus	exon	22205	22291	.	+	.	ID=Dca30483.1.exon12;Parent=Dca30483.1
scaffold3044	Augustus	exon	22414	22578	.	+	.	ID=Dca30483.1.exon13;Parent=Dca30483.1