Carnation DB

Dca30551.1

Annotation

15-exons
f-1
sp|B9HCJ1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1080718#GO:0005634;GO:0004484;GO:0004651;GO:0004725;GO:0008138;GO:0006370#4F1P1C
AT3G09100.2 | Symbols: | mRNA capping enzyme family protein | chr3:2788435-2792913 REVERSE LENGTH=672
Repeat List (scaffold3053)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30551.1	15	566	575	67.82	552	65	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HCJ1_POPTR	76	678	686	87.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30551.1	4	567	575	64.69	564	61	0
Target_name	Start	End	Length	Cov(%)
AT3G09100.2	61	671	672	90.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3053	Augus-PASA	mRNA	39775	51324	.	-	.	ID=Dca30551.1;Parent=Dca30551
scaffold3053	Augus-PASA	exon	39775	39921	.	-	.	ID=Dca30551.1.exon1;Parent=Dca30551.1
scaffold3053	Augus-PASA	exon	40016	40149	.	-	.	ID=Dca30551.1.exon2;Parent=Dca30551.1
scaffold3053	Augus-PASA	exon	40758	40842	.	-	.	ID=Dca30551.1.exon3;Parent=Dca30551.1
scaffold3053	Augus-PASA	exon	40957	41046	.	-	.	ID=Dca30551.1.exon4;Parent=Dca30551.1
scaffold3053	Augus-PASA	exon	41550	41648	.	-	.	ID=Dca30551.1.exon5;Parent=Dca30551.1
scaffold3053	Augus-PASA	exon	41788	41910	.	-	.	ID=Dca30551.1.exon6;Parent=Dca30551.1
scaffold3053	Augus-PASA	exon	42821	42952	.	-	.	ID=Dca30551.1.exon7;Parent=Dca30551.1
scaffold3053	Augustus	exon	43030	43192	.	-	.	ID=Dca30551.1.exon8;Parent=Dca30551.1
scaffold3053	Augustus	exon	44176	44225	.	-	.	ID=Dca30551.1.exon9;Parent=Dca30551.1
scaffold3053	Augustus	exon	46342	46461	.	-	.	ID=Dca30551.1.exon10;Parent=Dca30551.1
scaffold3053	Augustus	exon	46884	47087	.	-	.	ID=Dca30551.1.exon11;Parent=Dca30551.1
scaffold3053	Augustus	exon	47874	47936	.	-	.	ID=Dca30551.1.exon12;Parent=Dca30551.1
scaffold3053	Augustus	exon	48020	48103	.	-	.	ID=Dca30551.1.exon13;Parent=Dca30551.1
scaffold3053	Augustus	exon	49849	50000	.	-	.	ID=Dca30551.1.exon14;Parent=Dca30551.1
scaffold3053	Augustus	exon	51243	51324	.	-	.	ID=Dca30551.1.exon15;Parent=Dca30551.1