Carnation DB

Dca30557.1

Annotation

7-exons
f-1
sp|F6HLJ8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g06380#unknown#0F0P0C
AT1G51130.1 | Symbols: | Nse4, component of Smc5/6 DNA repair complex | chr1:18939480-18941560 REVERSE LENGTH=403
Repeat List (scaffold3054)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30557.1	4	418	420	55.23	415	56	7e-116
Target_name	Start	End	Length	Cov(%)
sp\|F6HLJ8_VITVI	5	376	380	97.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30557.1	49	408	420	42.14	360	49	6e-90
Target_name	Start	End	Length	Cov(%)
AT1G51130.1	59	393	403	83.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3054	Augustus	mRNA	68180	71923	.	+	.	ID=Dca30557.1;Parent=Dca30557
scaffold3054	Augustus	exon	68180	68372	.	+	.	ID=Dca30557.1.exon1;Parent=Dca30557.1
scaffold3054	Augustus	exon	68518	68598	.	+	.	ID=Dca30557.1.exon2;Parent=Dca30557.1
scaffold3054	Augustus	exon	69653	69908	.	+	.	ID=Dca30557.1.exon3;Parent=Dca30557.1
scaffold3054	Augustus	exon	69999	70089	.	+	.	ID=Dca30557.1.exon4;Parent=Dca30557.1
scaffold3054	Augustus	exon	71048	71258	.	+	.	ID=Dca30557.1.exon5;Parent=Dca30557.1
scaffold3054	Augustus	exon	71360	71451	.	+	.	ID=Dca30557.1.exon6;Parent=Dca30557.1
scaffold3054	Augustus	exon	71585	71923	.	+	.	ID=Dca30557.1.exon7;Parent=Dca30557.1