Carnation DB

Dca30809.1

Annotation

9-exons
f-1
sp|D7SH00_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g01250#unknown#0F0P0C
AT5G63520.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FIST C domain (InterPro:IPR019494), FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr5:25426300-25429093 REVERSE LENGTH=519
Repeat List (scaffold3091)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30809.1	14	477	485	47.21	464	45	1e-109
Target_name	Start	End	Length	Cov(%)
sp\|D7SH00_VITVI	8	519	527	97.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30809.1	15	477	485	41.44	463	40	3e-84
Target_name	Start	End	Length	Cov(%)
AT5G63520.1	23	516	519	95.18

seqname	source	feature	start	end	score	strand	frame	group
scaffold3091	Augustus	mRNA	17474	27073	.	-	.	ID=Dca30809.1;Parent=Dca30809
scaffold3091	Augustus	exon	17474	17882	.	-	.	ID=Dca30809.1.exon1;Parent=Dca30809.1
scaffold3091	Augustus	exon	18343	18461	.	-	.	ID=Dca30809.1.exon2;Parent=Dca30809.1
scaffold3091	Augustus	exon	19435	19625	.	-	.	ID=Dca30809.1.exon3;Parent=Dca30809.1
scaffold3091	Augustus	exon	21386	21547	.	-	.	ID=Dca30809.1.exon4;Parent=Dca30809.1
scaffold3091	Augustus	exon	23193	23232	.	-	.	ID=Dca30809.1.exon5;Parent=Dca30809.1
scaffold3091	Augustus	exon	23523	23651	.	-	.	ID=Dca30809.1.exon6;Parent=Dca30809.1
scaffold3091	Augustus	exon	25875	25967	.	-	.	ID=Dca30809.1.exon7;Parent=Dca30809.1
scaffold3091	Augustus	exon	26058	26165	.	-	.	ID=Dca30809.1.exon8;Parent=Dca30809.1
scaffold3091	Augustus	exon	26867	27073	.	-	.	ID=Dca30809.1.exon9;Parent=Dca30809.1