Carnation DB

Dca31072.1

Annotation

10-exons
f-1
sp|D7SN59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g01240#GO:0005622;GO:0008270#1F0P1C
sp|B9MTN7_POPTR#Histone deacetylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HDT903#GO:0005622;GO:0003676;GO:0008270#2F0P1C
Repeat List (scaffold312)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31072.1	5	310	311	45.33	306	40	2e-35
Target_name	Start	End	Length	Cov(%)
sp\|D7SN59_VITVI	1	351	353	99.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31072.1	5	281	311	37.62	277	40	2e-22
Target_name	Start	End	Length	Cov(%)
AT5G22650.1	1	274	306	89.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold312	Augustus	mRNA	42372	45131	.	+	.	ID=Dca31072.1;Parent=Dca31072
scaffold312	Augustus	exon	42372	42396	.	+	.	ID=Dca31072.1.exon1;Parent=Dca31072.1
scaffold312	Augustus	exon	43284	43354	.	+	.	ID=Dca31072.1.exon2;Parent=Dca31072.1
scaffold312	Augustus	exon	43472	43637	.	+	.	ID=Dca31072.1.exon3;Parent=Dca31072.1
scaffold312	Augustus	exon	43745	43867	.	+	.	ID=Dca31072.1.exon4;Parent=Dca31072.1
scaffold312	Augustus	exon	43960	44010	.	+	.	ID=Dca31072.1.exon5;Parent=Dca31072.1
scaffold312	Augustus	exon	44102	44229	.	+	.	ID=Dca31072.1.exon6;Parent=Dca31072.1
scaffold312	Augustus	exon	44345	44434	.	+	.	ID=Dca31072.1.exon7;Parent=Dca31072.1
scaffold312	Augustus	exon	44520	44604	.	+	.	ID=Dca31072.1.exon8;Parent=Dca31072.1
scaffold312	Augustus	exon	44832	44976	.	+	.	ID=Dca31072.1.exon9;Parent=Dca31072.1
scaffold312	Augustus	exon	45080	45131	.	+	.	ID=Dca31072.1.exon10;Parent=Dca31072.1