Carnation DB

Dca31117.1

Annotation

5-exons
f-1
sp|B9IE11_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824554#unknown#0F0P0C
sp|B9RLS5_RICCO#Synaptosomal associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1470520#unknown#0F0P0C
Repeat List (scaffold3124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31117.1	1	314	314	63.05	314	64	6e-102
Target_name	Start	End	Length	Cov(%)
sp\|B9IE11_POPTR	1	305	305	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31117.1	1	314	314	58.91	314	59	5e-93
Target_name	Start	End	Length	Cov(%)
AT5G61210.1	1	300	300	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3124	Augus-PASA	mRNA	17182	19463	.	-	.	ID=Dca31117.1;Parent=Dca31117
scaffold3124	Augus-PASA	exon	17182	17281	.	-	.	ID=Dca31117.1.exon1;Parent=Dca31117.1
scaffold3124	Augus-PASA	exon	17399	17496	.	-	.	ID=Dca31117.1.exon2;Parent=Dca31117.1
scaffold3124	Augus-PASA	exon	17966	18096	.	-	.	ID=Dca31117.1.exon3;Parent=Dca31117.1
scaffold3124	Augus-PASA	exon	18178	18271	.	-	.	ID=Dca31117.1.exon4;Parent=Dca31117.1
scaffold3124	Augustus	exon	18942	19463	.	-	.	ID=Dca31117.1.exon5;Parent=Dca31117.1