Carnation DB

Dca31191.1

Annotation

5-exons
f-2
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold3134)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31191.1	34	1534	1622	51.78	1501	56	0
Target_name	Start	End	Length	Cov(%)
sp\|A2I5E5_BETVU	1	1485	1501	98.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31191.1	422	1536	1622	25.46	1115	37	0
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	422	1474	1539	68.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3134	Augustus	mRNA	1153	8507	.	+	.	ID=Dca31191.1;Parent=Dca31191
scaffold3134	Augustus	exon	1153	1998	.	+	.	ID=Dca31191.1.exon1;Parent=Dca31191.1
scaffold3134	Augustus	exon	2118	5869	.	+	.	ID=Dca31191.1.exon2;Parent=Dca31191.1
scaffold3134	Augustus	exon	7553	7647	.	+	.	ID=Dca31191.1.exon3;Parent=Dca31191.1
scaffold3134	Augustus	exon	7919	8011	.	+	.	ID=Dca31191.1.exon4;Parent=Dca31191.1
scaffold3134	Augustus	exon	8424	8507	.	+	.	ID=Dca31191.1.exon5;Parent=Dca31191.1