Carnation DB

Dca31399.1

Annotation

10-exons
f-1
sp|F6GSZ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g00880#GO:0009982;GO:0003723;GO:0001522#2F1P0C
sp|B9RAA4_RICCO#Ribosomal pseudouridine synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1504920#GO:0003796;GO:0009982;GO:0003723;GO:0001522#3F1P0C
Repeat List (scaffold316)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31399.1	4	313	315	65.71	310	56	3e-102
Target_name	Start	End	Length	Cov(%)
sp\|F6GSZ9_VITVI	13	381	384	96.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31399.1	17	97	315	19.04	81	75	5e-31
Target_name	Start	End	Length	Cov(%)
AT5G51140.2	46	126	410	19.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold316	Augustus	mRNA	37550	43632	.	+	.	ID=Dca31399.1;Parent=Dca31399
scaffold316	Augustus	exon	37550	37616	.	+	.	ID=Dca31399.1.exon1;Parent=Dca31399.1
scaffold316	Augustus	exon	37724	37767	.	+	.	ID=Dca31399.1.exon2;Parent=Dca31399.1
scaffold316	Augustus	exon	37862	37939	.	+	.	ID=Dca31399.1.exon3;Parent=Dca31399.1
scaffold316	Augustus	exon	39209	39309	.	+	.	ID=Dca31399.1.exon4;Parent=Dca31399.1
scaffold316	Augustus	exon	40074	40146	.	+	.	ID=Dca31399.1.exon5;Parent=Dca31399.1
scaffold316	Augustus	exon	41290	41355	.	+	.	ID=Dca31399.1.exon6;Parent=Dca31399.1
scaffold316	Augustus	exon	41835	41891	.	+	.	ID=Dca31399.1.exon7;Parent=Dca31399.1
scaffold316	Augustus	exon	42260	42385	.	+	.	ID=Dca31399.1.exon8;Parent=Dca31399.1
scaffold316	Augustus	exon	42968	43203	.	+	.	ID=Dca31399.1.exon9;Parent=Dca31399.1
scaffold316	Augustus	exon	43533	43632	.	+	.	ID=Dca31399.1.exon10;Parent=Dca31399.1