Dca31454.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3168)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31454.1 |
1 |
199 |
526 |
27.18 |
199 |
72 |
5e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
836 |
896 |
22.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31454.1 |
37 |
215 |
526 |
10.64 |
179 |
31 |
4e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0432200-01 |
58 |
236 |
278 |
64.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3168 |
Augustus |
mRNA |
44271 |
50309 |
. |
- |
. |
ID=Dca31454.1;Parent=Dca31454 |
| scaffold3168 |
Augustus |
exon |
44271 |
45019 |
. |
- |
. |
ID=Dca31454.1.exon1;Parent=Dca31454.1 |
| scaffold3168 |
Augustus |
exon |
45106 |
45339 |
. |
- |
. |
ID=Dca31454.1.exon2;Parent=Dca31454.1 |
| scaffold3168 |
Augustus |
exon |
49712 |
50309 |
. |
- |
. |
ID=Dca31454.1.exon3;Parent=Dca31454.1 |
