Dca31506.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3175)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31506.1 |
799 |
1021 |
1066 |
13.41 |
223 |
65 |
1e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1144 |
1366 |
1501 |
14.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31506.1 |
330 |
795 |
1066 |
15.66 |
466 |
36 |
3e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
12 |
481 |
707 |
66.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3175 |
Augustus |
mRNA |
26220 |
36724 |
. |
+ |
. |
ID=Dca31506.1;Parent=Dca31506 |
| scaffold3175 |
Augustus |
exon |
26220 |
28595 |
. |
+ |
. |
ID=Dca31506.1.exon1;Parent=Dca31506.1 |
| scaffold3175 |
Augustus |
exon |
29700 |
30383 |
. |
+ |
. |
ID=Dca31506.1.exon2;Parent=Dca31506.1 |
| scaffold3175 |
Augustus |
exon |
36584 |
36724 |
. |
+ |
. |
ID=Dca31506.1.exon3;Parent=Dca31506.1 |
