Carnation DB

Dca31519.1

Annotation

7-exons
f-1
sp|B9SXI7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0503680#GO:0009507;GO:0005198#1F0P1C
AT2G42130.4 | Symbols: | Plastid-lipid associated protein PAP / fibrillin family protein | chr2:17566242-17567916 FORWARD LENGTH=299
Repeat List (scaffold3178)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31519.1	1	250	250	68.79	250	68	1e-95
Target_name	Start	End	Length	Cov(%)
sp\|B9SXI7_RICCO	46	297	297	84.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31519.1	1	250	250	68.4	250	68	3e-95
Target_name	Start	End	Length	Cov(%)
AT2G42130.4	50	299	299	83.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3178	Augus-PASA	mRNA	13123	21205	.	+	.	ID=Dca31519.1;Parent=Dca31519
scaffold3178	Augus-PASA	exon	13123	13218	.	+	.	ID=Dca31519.1.exon1;Parent=Dca31519.1
scaffold3178	Augus-PASA	exon	16923	17044	.	+	.	ID=Dca31519.1.exon2;Parent=Dca31519.1
scaffold3178	Augus-PASA	exon	17124	17198	.	+	.	ID=Dca31519.1.exon3;Parent=Dca31519.1
scaffold3178	Augus-PASA	exon	17441	17537	.	+	.	ID=Dca31519.1.exon4;Parent=Dca31519.1
scaffold3178	Augus-PASA	exon	18647	18863	.	+	.	ID=Dca31519.1.exon5;Parent=Dca31519.1
scaffold3178	Augus-PASA	exon	20036	20088	.	+	.	ID=Dca31519.1.exon6;Parent=Dca31519.1
scaffold3178	Augus-PASA	exon	21113	21205	.	+	.	ID=Dca31519.1.exon7;Parent=Dca31519.1