Dca31765.1
Annotation
- 4-exons
- f-1
- sp|A5CA93_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002796#GO:0003676;GO:0015074#1F1P0C
- sp|Q10M26_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g20930#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3203)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31765.1 |
1 |
39 |
292 |
8.56 |
39 |
65 |
4e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CA93_VITVI |
89 |
127 |
550 |
7.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31765.1 |
44 |
140 |
292 |
17.46 |
97 |
38 |
1e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
886 |
1019 |
1401 |
9.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3203 |
Augustus |
mRNA |
31691 |
33821 |
. |
- |
. |
ID=Dca31765.1;Parent=Dca31765 |
| scaffold3203 |
Augustus |
exon |
31691 |
32139 |
. |
- |
. |
ID=Dca31765.1.exon1;Parent=Dca31765.1 |
| scaffold3203 |
Augustus |
exon |
32599 |
32676 |
. |
- |
. |
ID=Dca31765.1.exon2;Parent=Dca31765.1 |
| scaffold3203 |
Augustus |
exon |
32879 |
33120 |
. |
- |
. |
ID=Dca31765.1.exon3;Parent=Dca31765.1 |
| scaffold3203 |
Augustus |
exon |
33712 |
33821 |
. |
- |
. |
ID=Dca31765.1.exon4;Parent=Dca31765.1 |
