Dca31797.1
Annotation
- 3-exons
- f-2
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold3209)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31797.1 |
70 |
702 |
802 |
34.53 |
633 |
39 |
2e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
727 |
1717 |
41.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31797.1 |
518 |
610 |
802 |
4.11 |
93 |
36 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3209 |
Augustus |
mRNA |
290 |
4160 |
. |
+ |
. |
ID=Dca31797.1;Parent=Dca31797 |
| scaffold3209 |
Augustus |
exon |
290 |
1583 |
. |
+ |
. |
ID=Dca31797.1.exon1;Parent=Dca31797.1 |
| scaffold3209 |
Augustus |
exon |
2922 |
3483 |
. |
+ |
. |
ID=Dca31797.1.exon2;Parent=Dca31797.1 |
| scaffold3209 |
Augustus |
exon |
3607 |
4160 |
. |
+ |
. |
ID=Dca31797.1.exon3;Parent=Dca31797.1 |
