Carnation DB

Dca31805.1

Annotation

8-exons
f-1
sp|D7KU71_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_475075#unknown#0F0P0C
Os04t0105700-01 Similar to B0616E02-H0507E05.5 protein.
Repeat List (scaffold321)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31805.1	1	235	235	65.53	235	65	6e-84
Target_name	Start	End	Length	Cov(%)
sp\|D7KU71_ARALL	1	236	236	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31805.1	1	235	235	62.97	235	63	7e-84
Target_name	Start	End	Length	Cov(%)
AT1G62780.1	1	237	237	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold321	Augustus	mRNA	16243	18668	.	-	.	ID=Dca31805.1;Parent=Dca31805
scaffold321	Augustus	exon	16243	16305	.	-	.	ID=Dca31805.1.exon1;Parent=Dca31805.1
scaffold321	Augustus	exon	16449	16538	.	-	.	ID=Dca31805.1.exon2;Parent=Dca31805.1
scaffold321	Augustus	exon	16653	16738	.	-	.	ID=Dca31805.1.exon3;Parent=Dca31805.1
scaffold321	Augustus	exon	16828	16888	.	-	.	ID=Dca31805.1.exon4;Parent=Dca31805.1
scaffold321	Augus-PASA	exon	16970	17042	.	-	.	ID=Dca31805.1.exon5;Parent=Dca31805.1
scaffold321	Augus-PASA	exon	17253	17350	.	-	.	ID=Dca31805.1.exon6;Parent=Dca31805.1
scaffold321	Augus-PASA	exon	17925	18074	.	-	.	ID=Dca31805.1.exon7;Parent=Dca31805.1
scaffold321	Augus-PASA	exon	18582	18668	.	-	.	ID=Dca31805.1.exon8;Parent=Dca31805.1