Dca31844.1
Annotation
- 3-exons
- f-1
- sp|Q9ZVW0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g07010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3215)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31844.1 |
3 |
444 |
500 |
40.79 |
442 |
43 |
1e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVW0_ARATH |
980 |
1411 |
1413 |
30.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31844.1 |
269 |
406 |
500 |
11.6 |
138 |
40 |
3e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
418 |
562 |
1262 |
11.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3215 |
Augustus |
mRNA |
1820 |
4764 |
. |
- |
. |
ID=Dca31844.1;Parent=Dca31844 |
| scaffold3215 |
Augustus |
exon |
1820 |
1889 |
. |
- |
. |
ID=Dca31844.1.exon1;Parent=Dca31844.1 |
| scaffold3215 |
Augustus |
exon |
2994 |
3561 |
. |
- |
. |
ID=Dca31844.1.exon2;Parent=Dca31844.1 |
| scaffold3215 |
Augustus |
exon |
3900 |
4764 |
. |
- |
. |
ID=Dca31844.1.exon3;Parent=Dca31844.1 |
