Carnation DB

Dca32111.1

Annotation

7-exons
f-1
sp|A9PJ33_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#unknown#0F0P0C
AT5G50150.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:20402444-20406375 REVERSE LENGTH=420
Repeat List (scaffold325)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32111.1	10	359	359	77.15	350	80	2e-164
Target_name	Start	End	Length	Cov(%)
sp\|A9PJ33_9ROSI	132	478	478	72.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32111.1	10	359	359	74.09	350	76	4e-165
Target_name	Start	End	Length	Cov(%)
AT5G50150.1	74	420	420	82.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold325	Augustus	mRNA	18262	24903	.	+	.	ID=Dca32111.1;Parent=Dca32111
scaffold325	Augustus	exon	18262	18288	.	+	.	ID=Dca32111.1.exon1;Parent=Dca32111.1
scaffold325	Augustus	exon	18402	18488	.	+	.	ID=Dca32111.1.exon2;Parent=Dca32111.1
scaffold325	Augustus	exon	18662	18883	.	+	.	ID=Dca32111.1.exon3;Parent=Dca32111.1
scaffold325	Augus-PASA	exon	19130	19294	.	+	.	ID=Dca32111.1.exon4;Parent=Dca32111.1
scaffold325	Augus-PASA	exon	19843	19896	.	+	.	ID=Dca32111.1.exon5;Parent=Dca32111.1
scaffold325	Augus-PASA	exon	19999	20145	.	+	.	ID=Dca32111.1.exon6;Parent=Dca32111.1
scaffold325	Augus-PASA	exon	24526	24903	.	+	.	ID=Dca32111.1.exon7;Parent=Dca32111.1