Carnation DB

Dca32119.1

Annotation

9-exons
f-1
sp|B9IEX8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_252279#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Os01t0911100-01 Similar to DEAD box RNA helicase1.
Repeat List (scaffold325)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32119.1	154	233	331	18.42	80	77	3e-29
Target_name	Start	End	Length	Cov(%)
sp\|B9IEX8_POPTR	273	352	450	17.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32119.1	59	168	331	20.84	110	58	1e-28
Target_name	Start	End	Length	Cov(%)
Os01t0197200-01	76	193	495	23.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold325	Augustus	mRNA	105808	109286	.	-	.	ID=Dca32119.1;Parent=Dca32119
scaffold325	Augustus	exon	105808	105918	.	-	.	ID=Dca32119.1.exon1;Parent=Dca32119.1
scaffold325	Augustus	exon	106532	106621	.	-	.	ID=Dca32119.1.exon2;Parent=Dca32119.1
scaffold325	Augustus	exon	106726	106814	.	-	.	ID=Dca32119.1.exon3;Parent=Dca32119.1
scaffold325	Augustus	exon	106888	107045	.	-	.	ID=Dca32119.1.exon4;Parent=Dca32119.1
scaffold325	Augustus	exon	107128	107213	.	-	.	ID=Dca32119.1.exon5;Parent=Dca32119.1
scaffold325	Augustus	exon	108078	108136	.	-	.	ID=Dca32119.1.exon6;Parent=Dca32119.1
scaffold325	Augustus	exon	108224	108406	.	-	.	ID=Dca32119.1.exon7;Parent=Dca32119.1
scaffold325	Augustus	exon	108539	108619	.	-	.	ID=Dca32119.1.exon8;Parent=Dca32119.1
scaffold325	Augustus	exon	109148	109286	.	-	.	ID=Dca32119.1.exon9;Parent=Dca32119.1