Dca32122.1
Annotation
- 4-exons
- f-1
- sp|B9IEX8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_252279#GO:0005524;GO:0008026;GO:0003676#3F0P0C
- sp|B9RGR4_RICCO#Dead box ATP-dependent RNA helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1442990#GO:0005524;GO:0008026;GO:0003676#3F0P0C
- Repeat List (scaffold325)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32122.1 |
51 |
181 |
211 |
36.96 |
131 |
46 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IEX8_POPTR |
9 |
181 |
450 |
38.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32122.1 |
71 |
181 |
211 |
33.64 |
111 |
55 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G63120.2 |
152 |
278 |
591 |
21.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold325 |
Augustus |
mRNA |
117690 |
120294 |
. |
- |
. |
ID=Dca32122.1;Parent=Dca32122 |
| scaffold325 |
Augustus |
exon |
117690 |
117782 |
. |
- |
. |
ID=Dca32122.1.exon1;Parent=Dca32122.1 |
| scaffold325 |
Augustus |
exon |
118998 |
119072 |
. |
- |
. |
ID=Dca32122.1.exon2;Parent=Dca32122.1 |
| scaffold325 |
Augustus |
exon |
119198 |
119376 |
. |
- |
. |
ID=Dca32122.1.exon3;Parent=Dca32122.1 |
| scaffold325 |
Augustus |
exon |
120006 |
120294 |
. |
- |
. |
ID=Dca32122.1.exon4;Parent=Dca32122.1 |
