Carnation DB

Dca32373.1

Annotation

12-exons
f-1
sp|C6TMJ1_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
AT3G54020.1 | Symbols: AtIPCS1 | Arabidopsis Inositol phosphorylceramide synthase 1 | chr3:20006098-20008020 FORWARD LENGTH=305
Repeat List (scaffold328)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32373.1	1	314	314	80.89	314	81	2e-150
Target_name	Start	End	Length	Cov(%)
sp\|C6TMJ1_SOYBN	1	314	314	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32373.1	1	314	314	74.52	314	75	4e-141
Target_name	Start	End	Length	Cov(%)
AT3G54020.1	1	305	305	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold328	Augus-PASA	mRNA	114809	117978	.	+	.	ID=Dca32373.1;Parent=Dca32373
scaffold328	Augus-PASA	exon	114809	114841	.	+	.	ID=Dca32373.1.exon1;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	114954	115043	.	+	.	ID=Dca32373.1.exon2;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	115496	115582	.	+	.	ID=Dca32373.1.exon3;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	115664	115732	.	+	.	ID=Dca32373.1.exon4;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	115864	115944	.	+	.	ID=Dca32373.1.exon5;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	116310	116381	.	+	.	ID=Dca32373.1.exon6;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	116505	116565	.	+	.	ID=Dca32373.1.exon7;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	116661	116763	.	+	.	ID=Dca32373.1.exon8;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	116893	116988	.	+	.	ID=Dca32373.1.exon9;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	117082	117128	.	+	.	ID=Dca32373.1.exon10;Parent=Dca32373.1
scaffold328	Augus-PASA	exon	117676	117803	.	+	.	ID=Dca32373.1.exon11;Parent=Dca32373.1
scaffold328	Augustus	exon	117901	117978	.	+	.	ID=Dca32373.1.exon12;Parent=Dca32373.1