Carnation DB

Dca3252.1

Annotation

9-exons
f-1
sp|A5CB46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_027347#unknown#0F0P0C
AT3G54190.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:20061759-20063880 REVERSE LENGTH=467
Repeat List (scaffold1115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3252.1	1	473	507	81.06	473	87	0
Target_name	Start	End	Length	Cov(%)
sp\|A5CB46_VITVI	1	469	481	97.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3252.1	1	473	507	74.35	473	80	0
Target_name	Start	End	Length	Cov(%)
AT3G54190.1	1	455	467	97.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1115	Augus-PASA	mRNA	76471	81784	.	+	.	ID=Dca3252.1;Parent=Dca3252
scaffold1115	Augus-PASA	exon	76471	76671	.	+	.	ID=Dca3252.1.exon1;Parent=Dca3252.1
scaffold1115	Augus-PASA	exon	78353	78500	.	+	.	ID=Dca3252.1.exon2;Parent=Dca3252.1
scaffold1115	Augus-PASA	exon	78593	78743	.	+	.	ID=Dca3252.1.exon3;Parent=Dca3252.1
scaffold1115	Augustus	exon	78944	79069	.	+	.	ID=Dca3252.1.exon4;Parent=Dca3252.1
scaffold1115	Augustus	exon	79177	79257	.	+	.	ID=Dca3252.1.exon5;Parent=Dca3252.1
scaffold1115	Augustus	exon	80223	80415	.	+	.	ID=Dca3252.1.exon6;Parent=Dca3252.1
scaffold1115	Augustus	exon	80520	80790	.	+	.	ID=Dca3252.1.exon7;Parent=Dca3252.1
scaffold1115	Augustus	exon	81145	81393	.	+	.	ID=Dca3252.1.exon8;Parent=Dca3252.1
scaffold1115	Augustus	exon	81681	81784	.	+	.	ID=Dca3252.1.exon9;Parent=Dca3252.1