Carnation DB

Dca32523.1

Annotation

5-exons
f-1
sp|B9HAT5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_654203#unknown#0F0P0C
Repeat List (scaffold33)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32523.1	4	241	244	44.26	238	40	5e-34
Target_name	Start	End	Length	Cov(%)
sp\|B9HAT5_POPTR	3	258	262	97.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32523.1	2	237	244	36.88	236	37	9e-23
Target_name	Start	End	Length	Cov(%)
AT4G32030.1	11	246	253	93.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold33	Augus-PASA	mRNA	153039	155311	.	+	.	ID=Dca32523.1;Parent=Dca32523
scaffold33	Augus-PASA	exon	153039	153377	.	+	.	ID=Dca32523.1.exon1;Parent=Dca32523.1
scaffold33	Augus-PASA	exon	154608	154664	.	+	.	ID=Dca32523.1.exon2;Parent=Dca32523.1
scaffold33	Augus-PASA	exon	154791	154853	.	+	.	ID=Dca32523.1.exon3;Parent=Dca32523.1
scaffold33	Augus-PASA	exon	154948	155016	.	+	.	ID=Dca32523.1.exon4;Parent=Dca32523.1
scaffold33	Augus-PASA	exon	155105	155311	.	+	.	ID=Dca32523.1.exon5;Parent=Dca32523.1