Carnation DB

Dca32680.1

Annotation

5-exons
f-1
sp|A5CBQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013115#GO:0003676;GO:0015074#1F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold3310)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32680.1	274	1151	1151	47.35	878	58	0
Target_name	Start	End	Length	Cov(%)
sp\|A5CBQ4_VITVI	247	1178	1178	79.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32680.1	259	1147	1151	27.88	889	33	1e-129
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	458	1422	1428	67.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3310	Augustus	mRNA	13455	20200	.	+	.	ID=Dca32680.1;Parent=Dca32680
scaffold3310	Augustus	exon	13455	14010	.	+	.	ID=Dca32680.1.exon1;Parent=Dca32680.1
scaffold3310	Augustus	exon	16823	17106	.	+	.	ID=Dca32680.1.exon2;Parent=Dca32680.1
scaffold3310	Augustus	exon	17334	18477	.	+	.	ID=Dca32680.1.exon3;Parent=Dca32680.1
scaffold3310	Augustus	exon	18576	19081	.	+	.	ID=Dca32680.1.exon4;Parent=Dca32680.1
scaffold3310	Augustus	exon	19235	20200	.	+	.	ID=Dca32680.1.exon5;Parent=Dca32680.1