Carnation DB

Dca32839.1

Annotation

5-exons
f-688
sp|O23864_9ORYZ#Polyprotein#Oryza australiensis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold3332)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32839.1	306	599	599	33.22	294	68	4e-118
Target_name	Start	End	Length	Cov(%)
sp\|O23864_9ORYZ	841	1134	1317	22.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32839.1	2	308	599	17.69	307	35	6e-46
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	976	1273	1401	21.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3332	Augustus	mRNA	1723	5372	.	+	.	ID=Dca32839.1;Parent=Dca32839
scaffold3332	Augustus	exon	1723	2079	.	+	.	ID=Dca32839.1.exon1;Parent=Dca32839.1
scaffold3332	Augustus	exon	2426	2563	.	+	.	ID=Dca32839.1.exon2;Parent=Dca32839.1
scaffold3332	Augustus	exon	2651	2747	.	+	.	ID=Dca32839.1.exon3;Parent=Dca32839.1
scaffold3332	Augustus	exon	3395	4404	.	+	.	ID=Dca32839.1.exon4;Parent=Dca32839.1
scaffold3332	Augustus	exon	4488	5372	.	+	.	ID=Dca32839.1.exon5;Parent=Dca32839.1