Carnation DB

Dca33274.1

Annotation

7-exons
f-1
sp|B9HJR3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766289#GO:0016020#0F0P1C
sp|B9SZH5_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0393280#GO:0016020#0F0P1C
Repeat List (scaffold3398)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33274.1	5	338	340	59.11	334	57	5e-107
Target_name	Start	End	Length	Cov(%)
sp\|B9HJR3_POPTR	6	353	355	98.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33274.1	2	336	340	43.82	335	42	4e-63
Target_name	Start	End	Length	Cov(%)
AT3G28050.1	7	361	367	96.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3398	Augustus	mRNA	21917	25154	.	+	.	ID=Dca33274.1;Parent=Dca33274
scaffold3398	Augustus	exon	21917	22095	.	+	.	ID=Dca33274.1.exon1;Parent=Dca33274.1
scaffold3398	Augustus	exon	22334	22399	.	+	.	ID=Dca33274.1.exon2;Parent=Dca33274.1
scaffold3398	Augustus	exon	23091	23162	.	+	.	ID=Dca33274.1.exon3;Parent=Dca33274.1
scaffold3398	Augustus	exon	23432	23672	.	+	.	ID=Dca33274.1.exon4;Parent=Dca33274.1
scaffold3398	Augustus	exon	23755	23913	.	+	.	ID=Dca33274.1.exon5;Parent=Dca33274.1
scaffold3398	Augustus	exon	24162	24313	.	+	.	ID=Dca33274.1.exon6;Parent=Dca33274.1
scaffold3398	Augustus	exon	25001	25154	.	+	.	ID=Dca33274.1.exon7;Parent=Dca33274.1