Carnation DB

Dca33303.1

Annotation

5-exons
f-1
sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold34)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33303.1	1	421	514	46.3	421	54	4e-131
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F1_BETVU	444	879	1399	31.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33303.1	1	230	514	17.89	230	38	6e-44
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	550	792	829	29.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold34	Augustus	mRNA	170156	172182	.	-	.	ID=Dca33303.1;Parent=Dca33303
scaffold34	Augustus	exon	170156	170439	.	-	.	ID=Dca33303.1.exon1;Parent=Dca33303.1
scaffold34	Augustus	exon	170652	170937	.	-	.	ID=Dca33303.1.exon2;Parent=Dca33303.1
scaffold34	Augustus	exon	171035	171134	.	-	.	ID=Dca33303.1.exon3;Parent=Dca33303.1
scaffold34	Augustus	exon	171219	171533	.	-	.	ID=Dca33303.1.exon4;Parent=Dca33303.1
scaffold34	Augustus	exon	171623	172182	.	-	.	ID=Dca33303.1.exon5;Parent=Dca33303.1