Dca3340.1
Annotation
- 3-exons
- f-1
- sp|F6HFJ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04770#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- sp|B9SJ37_RICCO#E3 ubiquitin ligase PUB14, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0842310#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- Repeat List (scaffold1119)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3340.1 |
36 |
501 |
501 |
62.47 |
466 |
54 |
6e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HFJ0_VITVI |
26 |
599 |
639 |
89.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3340.1 |
33 |
501 |
501 |
56.08 |
469 |
50 |
2e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G71020.1 |
26 |
584 |
628 |
89.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1119 |
Augustus |
mRNA |
90535 |
93924 |
. |
+ |
. |
ID=Dca3340.1;Parent=Dca3340 |
| scaffold1119 |
Augustus |
exon |
90535 |
90825 |
. |
+ |
. |
ID=Dca3340.1.exon1;Parent=Dca3340.1 |
| scaffold1119 |
Augustus |
exon |
92395 |
92811 |
. |
+ |
. |
ID=Dca3340.1.exon2;Parent=Dca3340.1 |
| scaffold1119 |
Augustus |
exon |
93127 |
93924 |
. |
+ |
. |
ID=Dca3340.1.exon3;Parent=Dca3340.1 |
