Dca33440.1
Annotation
- 3-exons
- f-1
- sp|B4FZ33_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#unknown#0F0P0C
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold3413)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33440.1 |
15 |
447 |
450 |
58.44 |
433 |
51 |
3e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B4FZ33_MAIZE |
3 |
526 |
526 |
99.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33440.1 |
39 |
429 |
450 |
33.55 |
391 |
32 |
4e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
98 |
582 |
1262 |
38.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3413 |
Augustus |
mRNA |
28073 |
29646 |
. |
+ |
. |
ID=Dca33440.1;Parent=Dca33440 |
| scaffold3413 |
Augustus |
exon |
28073 |
28567 |
. |
+ |
. |
ID=Dca33440.1.exon1;Parent=Dca33440.1 |
| scaffold3413 |
Augustus |
exon |
28655 |
29159 |
. |
+ |
. |
ID=Dca33440.1.exon2;Parent=Dca33440.1 |
| scaffold3413 |
Augustus |
exon |
29294 |
29646 |
. |
+ |
. |
ID=Dca33440.1.exon3;Parent=Dca33440.1 |
