Dca33464.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3417)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33464.1 |
18 |
122 |
125 |
32 |
105 |
38 |
5e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
11 |
114 |
1296 |
8.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33464.1 |
30 |
122 |
125 |
28 |
93 |
38 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
25 |
115 |
369 |
24.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3417 |
Augustus |
mRNA |
32558 |
33045 |
. |
- |
. |
ID=Dca33464.1;Parent=Dca33464 |
| scaffold3417 |
Augustus |
exon |
32558 |
32577 |
. |
- |
. |
ID=Dca33464.1.exon1;Parent=Dca33464.1 |
| scaffold3417 |
Augustus |
exon |
32688 |
33045 |
. |
- |
. |
ID=Dca33464.1.exon2;Parent=Dca33464.1 |
