Carnation DB

Dca33490.1

Annotation

8-exons
f-1
sp|B9IM33_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_737837#GO:0005525;GO:0007264#1F1P0C
AT2G24765.1 | Symbols: ARF3, ARL1, ATARL1 | ADP-ribosylation factor 3 | chr2:10562822-10564961 FORWARD LENGTH=182
Repeat List (scaffold342)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33490.1	1	182	182	95.05	182	96	1e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9IM33_POPTR	1	182	182	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33490.1	1	180	182	93.4	180	95	3e-99
Target_name	Start	End	Length	Cov(%)
AT2G24765.1	1	180	182	98.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold342	Augus-PASA	mRNA	127800	133970	.	-	.	ID=Dca33490.1;Parent=Dca33490
scaffold342	Augus-PASA	exon	127800	127833	.	-	.	ID=Dca33490.1.exon1;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	127940	128070	.	-	.	ID=Dca33490.1.exon2;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	129406	129453	.	-	.	ID=Dca33490.1.exon3;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	129649	129760	.	-	.	ID=Dca33490.1.exon4;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	132001	132019	.	-	.	ID=Dca33490.1.exon5;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	133486	133548	.	-	.	ID=Dca33490.1.exon6;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	133704	133742	.	-	.	ID=Dca33490.1.exon7;Parent=Dca33490.1
scaffold342	Augus-PASA	exon	133868	133970	.	-	.	ID=Dca33490.1.exon8;Parent=Dca33490.1